Hi, ISA WILL block uploads to FTP servers.
To configure FTP filtering
1. In the console tree of ISA Server Management, click Firewall Policy.
Where?
Microsoft Internet Security and Acceleration Server 2004
Server_Name
Firewall Policy
2. In the details pane, click a server publishing rule or access rule that applies to FTP traffic.
3. On the Tasks tab, click Edit Selected Rule.
4. On the Traffic tab (for a server publishing rule) or on the Protocols tab (for an access rule), click Filtering, and then click Configure
FTP.
5. On the Protocol tab, select Read Only, if FTP uploads should be blocked. (You would deselect This)
Note
To open ISA Server Management, click Start, point to All Programs, point to Microsoft ISA Server, and then click ISA Server Management.